CDS

Accession Number TCMCG006C21884
gbkey CDS
Protein Id XP_022554756.1
Location complement(join(20580391..20580576,20580668..20580797,20580885..20580991,20581073..20581166,20581260..20581456,20581543..20581614,20581691..20581805,20581976..20582092,20582181..20582272,20582365..20582541,20582638..20582712,20582858..20582998,20583077..20583265,20583415..20583480,20583578..20583728,20584005..20584073,20584260..20584408,20584502..20584633,20584735..20585060,20585188..20585224,20585360..20585414,20585587..20585648,20585731..20585751,20586103..20586105))
Gene LOC106405924
GeneID 106405924
Organism Brassica napus

Protein

Length 920aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022699035.1
Definition coatomer subunit beta'-2 isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17302        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTCTCAGGCTTGAGATCAAGAAAAAATTAGCTCAAAGGTCTGAGAGAGTGAAATCTGTGGATCTGCATCCTACAGAACCATGGATTTTAGCAAGTTTGTATTCTGGAACCTTGTGTATTTGGAACTACCAGACACAGGTGATGGCAAAATCTTTCGAGGTGACCGATTTACCAGTTCGGTCAGCCAAGTTTATTGCACGAAAGCAATGGGTTGTGGCTGGAGCTGATGACCTGTATATCCGTGTATACAATTACAATACCATGGACAAAGTTAAAGTGTTTGAGGCTCATTCAGACTACATCCGATGTGTGGCTGTTCATCCAACACTTCCATATGTTCTGTCATCGTCTGATGATATGCTCATAAAGCTTTGGGACTGGGAAAAGGGTTGGGCATGCACTCAGATATTCGAGGGACACTCGCACTATGTGATGCAAGTCACATTTAATCCAAAAGACACCAACACTTTTGCCAGTGCATCACTTGATCGTACTATAAAGATCTGGAATCTTGGTTCTCCAGACCCAAATTTTACTTTGGATGCCCATCAGAAAGGAGTCAATTGTGTGGATTATTTCACTGGTGGTGACAAGCCCTATCTAATTACAGGCTCTGACGATCACACTGCGAAGGTTTGGGACTATCAAACAAAAAGTTGTGTCCAGACCCTGGACGGGCACACTCACAACGTATCTGCAGTATGTTTCCATCCAGAGCTTCCAATTATAATCACAGGTTCTGAAGACGGCACCGTTCGCATTTGGCATTCAACTACGTACAGGCTAGAGAACACATTAAACTATGGCCTCGAGAGAGTTTGGGCCATTGGTTACGTTAAAAGTTCACGCCGGGTTGTGATAGGATATGACGAAGGAACCATCATGGTTAAACTGGGACGAGAAGTTCCTGTTGCTAGCATGGACAATACTGGAAAAATCATATGGGCTAAGCATAATGAAATTCAAACTGCGAACATAAAAAGTATTGGTGCAGATTACGAGGTTACTGATGGAGAGAGGTTGCCCTTGGCTGTTAAAGAGCTTGGGACCTGTGATCTATATCCACAAAGCTTGAAGCACAATCCGAATGGGAGGTTTGTCGTAGTCTGTGGAGACGGGGAGTATATAATCTATACGGCTTTGGCTTGGAGAAATAGATCATTTGGTTCGGGACTGGAATTCGTTTGGTCGTCTGAGGGTGAGTGTGTGGTTAGAGAAAGCTCATCAAAGATTAAGACATTTAGCAAAAATTTCCAGGAAAAGAAGAGTATCCGCCCTACTTTCTCAGCTGAGAAGATCTTTGGAGGAACCTTGTTAGCTATGTGTTCAAATGATTTCATCTGCTTTTATGATTGGGCTGAATGTAGGCTTATTCAACGTATTGACGTCACTGTAAAGAATCTATATTGGGCTGACAGTGGTGATTTAGTAGCCATTGCTAGTGACACGTCATTCTACATCTTGAAATACAACCGCGACTTAGTTTCCTCACATTTTGATAGTGGAAGATCTACGGAGGAAGAAGGTGTTGAGGATGCTTTTGAGGTTCTTCATGAGAATGACGAACGTGTTAGGACGGGTCTATGGGTTGGTGACTGTTTCATTTACAACAACTCTTCCTCGAAGCTTAACTATTGTGTCGGAGGCGAGGTAACCACAATGTATCATTTGGACCGACCAATGTATTTGTTGGGCTATCTTGCAAGTCAAAGTCGGGTCTTCTTGGTAGACAAAGAATTCAATGTAATAGGGTACACCTTGCTGCTAAGCCTGATTGAGTACAAGACTCTTGTGATGCGAGGTGATCTAGAGAAAGCCAGTGTAATCTTACCTACAATTCCTAAAGATCAGCATAACAGTGTTGCTCATTTCTTGGAGTCACGAGGAATGATTGAAGAAGCTCTAGAAATTGCGACAGATCCTGACTACAGATTTGAGTTGGCCATACAACTGGGTAGACTTGAAATTGCTCAGGAAATCGCTGTAGAAGTACAGAGCGAGTCTAAATGGAAGCAATTAGGGGAGTTGGCAATGTCATCTGGGAAGCTGCAATTGGCAGAGGAGTGCATGAAGTATGCGATGGATCTGAGTGGTTTGTTACTGCTTTACTCTTCTTTGGGAGATGCTGAAGGTGTGTCAAAGCTTGCGACACTTGCTAAAGAACAAGGGAAGAACAATGTAGCCTATCTTTGCCTATTCATGCTCGGTAAATTGGAAGATTGTTTGGACTTGTTGGTGGAGAGCAACCGGATACCTGAAGCTGCTCTGATGGCAAGATCATATCTTCCAAGCAAAGTATCTGAGATAGTAGCTCTTTGGAGGAAAGATCTCAGCAAGATAAATTCAAAAGCAGCAGAATCTTTGGCTGATCCAGAGGAGTACTCAAATCTGTTTGATGATTGGCAAGTTGCTCTTTCCGTCGAAGCAAGAGCTGCGGAGACAAGGGGAGTTTATACAGCTGCAGAAAATTATCCTAGTCATGCTGATAGATCTTCCATGACCCTCGTGGAAGCCTTTAGAAACTTGCAAGTTGAGGAAGAGGGATCACTTGAAAATGGAGATATGGATCACGAGGAGGTGGTAGCAGAAGAAAACGGAGATGAAGAAAAGAATGAGGATGTAGAGGAACATCATCAAGAAGAACAAGAAGAAGAAGGAGTTGTTGTTGATGGTGACTCGACCGATGGAGCAGTGCTTGTTAACGGAAGTGAGGCTGAAGAAGAGTGGGGTACGAATAATGAAGGAAACCCATCAGCCTAA
Protein:  
MPLRLEIKKKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTDLPVRSAKFIARKQWVVAGADDLYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYVKSSRRVVIGYDEGTIMVKLGREVPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECVVRESSSKIKTFSKNFQEKKSIRPTFSAEKIFGGTLLAMCSNDFICFYDWAECRLIQRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDLVSSHFDSGRSTEEEGVEDAFEVLHENDERVRTGLWVGDCFIYNNSSSKLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVMRGDLEKASVILPTIPKDQHNSVAHFLESRGMIEEALEIATDPDYRFELAIQLGRLEIAQEIAVEVQSESKWKQLGELAMSSGKLQLAEECMKYAMDLSGLLLLYSSLGDAEGVSKLATLAKEQGKNNVAYLCLFMLGKLEDCLDLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSKINSKAAESLADPEEYSNLFDDWQVALSVEARAAETRGVYTAAENYPSHADRSSMTLVEAFRNLQVEEEGSLENGDMDHEEVVAEENGDEEKNEDVEEHHQEEQEEEGVVVDGDSTDGAVLVNGSEAEEEWGTNNEGNPSA